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## T

target - Variable in class edu.claflin.finder.logic.cygrouper.CygrouperEdge
terminalLogs - Variable in class edu.claflin.finder.log.LogUtil
  The HashMap used for determining which of the logging outputs are logged to the terminal.
testFile(File) - Static method in class edu.claflin.finder.io.graph.SIFGraphIO
  Tests to see if a File is a valid graph file.
testFile(File) - Static method in class edu.claflin.finder.io.graph.SimpleGraphIO
  Tests to see if a File is a valid graph file.
toNumber(Object) - Method in class edu.claflin.finder.logic.comp.EdgeWeightComparator
  Converts an unknown object into a BigDecimal if possible.
toString() - Method in enum edu.claflin.finder.algo.ArgumentsBundle.COMMON_ARGS
toString() - Method in class edu.claflin.finder.algo.ArgumentsBundle
toString() - Method in enum edu.claflin.finder.log.LogLevel
toString() - Method in enum edu.claflin.finder.log.LogType
  Used to get a user friendly version of the LogType.
toString() - Method in class edu.claflin.finder.logic.cygrouper.CygrouperEdge
toString() - Method in class edu.claflin.finder.logic.cygrouper.CygrouperNode
toString() - Method in class edu.claflin.finder.logic.Edge
toString() - Method in class edu.claflin.finder.logic.Node
transpose(int, int) - Method in class edu.claflin.finder.logic.Graph
  Transposes the specified nodes.
transpose(String, String) - Method in class edu.claflin.finder.logic.Graph
  Deprecated.
  Outdated since v3. Replaced by {}
transpose(Node, Node) - Method in class edu.claflin.finder.logic.Graph
  Transposes the specified nodes.
tree - Variable in class edu.claflin.finder.logic.cygrouper.CytogrouperMain

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